indraroy
commited on
Commit
·
8cb794e
1
Parent(s):
703037f
Fix loader path for HF dataset
Browse files- isonetpp_loader.py +12 -11
- subiso_dataset.py +3 -2
isonetpp_loader.py
CHANGED
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@@ -6,7 +6,8 @@ from huggingface_hub import hf_hub_download
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from subiso_dataset import (
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SubgraphIsomorphismDataset,
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TRAIN_MODE, VAL_MODE, TEST_MODE, BROAD_TEST_MODE
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)
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# ----------------------------
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@@ -58,14 +59,14 @@ def _ensure_paths(
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"""
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folder = _folder_for_size(dataset_size) # "large_dataset" or "small_dataset"
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base = _normalize_name(dataset_name, dataset_size) # e.g., "aids240k"
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prefix, mode_dir = _mode_prefix_and_dir(mode)
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query_fname = f"{
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rel_fname = f"{
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corpus_fname = f"{base}_corpus_subgraphs.pkl"
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repo_query_path = f"{folder}/splits/{
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repo_rel_path = f"{folder}/splits/{
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repo_corpus_path = f"{folder}/corpus/{corpus_fname}"
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kwargs = dict(
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@@ -91,17 +92,17 @@ def load_isonetpp_benchmark(
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dataset_name: str = "aids", # "aids" or "aids240k" (same for mutag/ptc_*)
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dataset_size: str = "large", # "small" | "large"
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batch_size: int = 128,
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data_type: str = "
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device: Optional[str] = None,
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download_root: Optional[str] = None,
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):
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# Map to class
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mode_map = {
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"train": TRAIN_MODE,
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"val": VAL_MODE,
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"test": TEST_MODE,
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"extra_test_300": BROAD_TEST_MODE,
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"Extra_test_300": BROAD_TEST_MODE,
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}
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mode_norm = mode_map.get(mode, mode)
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@@ -133,7 +134,7 @@ def load_isonetpp_benchmark(
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batch_size=batch_size,
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data_type=data_type,
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dataset_base_path=parent_dir, # parent of <folder>
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-
dataset_path_override=_folder_for_size(dataset_size), # "large_dataset"/"small_dataset"
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experiment=None,
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device=device,
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)
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from subiso_dataset import (
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SubgraphIsomorphismDataset,
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# TRAIN_MODE, VAL_MODE, TEST_MODE, BROAD_TEST_MODE
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TRAIN_MODE, VAL_MODE, TEST_MODE
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)
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# ----------------------------
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"""
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folder = _folder_for_size(dataset_size) # "large_dataset" or "small_dataset"
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base = _normalize_name(dataset_name, dataset_size) # e.g., "aids240k"
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# prefix, mode_dir = _mode_prefix_and_dir(mode)
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query_fname = f"{mode}_{base}_query_subgraphs.pkl"
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rel_fname = f"{mode}_{base}_rel_nx_is_subgraph_iso.pkl"
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corpus_fname = f"{base}_corpus_subgraphs.pkl"
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repo_query_path = f"{folder}/splits/{mode}/{query_fname}"
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repo_rel_path = f"{folder}/splits/{mode}/{rel_fname}"
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repo_corpus_path = f"{folder}/corpus/{corpus_fname}"
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kwargs = dict(
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dataset_name: str = "aids", # "aids" or "aids240k" (same for mutag/ptc_*)
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dataset_size: str = "large", # "small" | "large"
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batch_size: int = 128,
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data_type: str = "gmn", # "pyg" or "gmn"
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device: Optional[str] = None,
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download_root: Optional[str] = None,
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):
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# Map to class constantss
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mode_map = {
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"train": TRAIN_MODE,
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"val": VAL_MODE,
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"test": TEST_MODE,
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# "extra_test_300": BROAD_TEST_MODE,
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# "Extra_test_300": BROAD_TEST_MODE,
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}
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mode_norm = mode_map.get(mode, mode)
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batch_size=batch_size,
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data_type=data_type,
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dataset_base_path=parent_dir, # parent of <folder>
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dataset_path_override=None,# _folder_for_size(dataset_size), # "large_dataset"/"small_dataset"
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experiment=None,
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device=device,
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)
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subiso_dataset.py
CHANGED
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@@ -13,7 +13,7 @@ from torch_geometric.data import Data
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TRAIN_MODE = "train"
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VAL_MODE = "val"
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TEST_MODE = "test"
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BROAD_TEST_MODE = "Extra_test_300"
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GMN_DATA_TYPE = "gmn"
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PYG_DATA_TYPE = "pyg"
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@@ -25,7 +25,8 @@ GraphCollection = collections.namedtuple(
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class SubgraphIsomorphismDataset:
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def __init__(self, mode, dataset_name, dataset_size, batch_size, data_type, dataset_base_path, experiment, dataset_path_override=None, device=None):
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assert mode in [TRAIN_MODE, VAL_MODE, TEST_MODE, BROAD_TEST_MODE]
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self.mode = mode
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self.dataset_name = dataset_name
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self.dataset_size = dataset_size
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TRAIN_MODE = "train"
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VAL_MODE = "val"
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TEST_MODE = "test"
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# BROAD_TEST_MODE = "Extra_test_300"
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GMN_DATA_TYPE = "gmn"
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PYG_DATA_TYPE = "pyg"
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class SubgraphIsomorphismDataset:
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def __init__(self, mode, dataset_name, dataset_size, batch_size, data_type, dataset_base_path, experiment, dataset_path_override=None, device=None):
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# assert mode in [TRAIN_MODE, VAL_MODE, TEST_MODE, BROAD_TEST_MODE]
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assert mode in [TRAIN_MODE, VAL_MODE, TEST_MODE]
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self.mode = mode
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self.dataset_name = dataset_name
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self.dataset_size = dataset_size
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