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|
| | import math |
| | from typing import List, Optional, Tuple, Type |
| |
|
| | import torch |
| | import torch.nn as nn |
| | import torch.nn.functional as F |
| |
|
| |
|
| | class LayerNorm2d(nn.Module): |
| | def __init__(self, num_channels: int, eps: float = 1e-6) -> None: |
| | super().__init__() |
| | self.weight = nn.Parameter(torch.ones(num_channels)) |
| | self.bias = nn.Parameter(torch.zeros(num_channels)) |
| | self.eps = eps |
| |
|
| | def forward(self, x: torch.Tensor) -> torch.Tensor: |
| | u = x.mean(1, keepdim=True) |
| | s = (x - u).pow(2).mean(1, keepdim=True) |
| | x = (x - u) / torch.sqrt(s + self.eps) |
| | x = self.weight[:, None, None] * x + self.bias[:, None, None] |
| | return x |
| |
|
| |
|
| | class PatchEmbed(nn.Module): |
| | """2D Image to Patch Embedding""" |
| |
|
| | def __init__( |
| | self, |
| | img_size, |
| | patch_size, |
| | in_chans, |
| | embed_dim, |
| | ): |
| | super().__init__() |
| | self.proj = nn.Conv2d( |
| | in_chans, |
| | embed_dim, |
| | kernel_size=(patch_size, patch_size), |
| | stride=(patch_size, patch_size), |
| | bias=True, |
| | ) |
| |
|
| | def forward(self, x): |
| | B, C, H, W = x.shape |
| | x = self.proj(x) |
| | return x |
| |
|
| |
|
| | class Attention(nn.Module): |
| | def __init__( |
| | self, |
| | dim, |
| | num_heads, |
| | qkv_bias, |
| | qk_scale=None, |
| | ): |
| | super().__init__() |
| | self.num_heads = num_heads |
| | head_dim = dim // num_heads |
| | self.scale = qk_scale or head_dim**-0.5 |
| | self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias) |
| | self.proj = nn.Linear(dim, dim) |
| |
|
| | def forward(self, x): |
| | B, N, C = x.shape |
| | qkv = ( |
| | self.qkv(x) |
| | .reshape(B, N, 3, self.num_heads, C // self.num_heads) |
| | .permute(2, 0, 3, 1, 4) |
| | ) |
| | q, k, v = ( |
| | qkv[0], |
| | qkv[1], |
| | qkv[2], |
| | ) |
| | attn = (q @ k.transpose(-2, -1)) * self.scale |
| | attn = attn.softmax(dim=-1) |
| | x = (attn @ v).transpose(1, 2).reshape(B, N, C) |
| | x = self.proj(x) |
| | return x |
| |
|
| |
|
| | class Mlp(nn.Module): |
| | def __init__( |
| | self, |
| | in_features, |
| | hidden_features=None, |
| | out_features=None, |
| | act_layer=nn.GELU, |
| | ): |
| | super().__init__() |
| | out_features = out_features or in_features |
| | hidden_features = hidden_features or in_features |
| | self.fc1 = nn.Linear(in_features, hidden_features) |
| | self.act = act_layer() |
| | self.fc2 = nn.Linear(hidden_features, out_features) |
| |
|
| | def forward(self, x): |
| | x = self.fc1(x) |
| | x = self.act(x) |
| | x = self.fc2(x) |
| | return x |
| |
|
| |
|
| | class Block(nn.Module): |
| | def __init__( |
| | self, |
| | dim, |
| | num_heads, |
| | mlp_ratio=4.0, |
| | qkv_bias=False, |
| | qk_scale=None, |
| | act_layer=nn.GELU, |
| | ): |
| | super().__init__() |
| | self.norm1 = nn.LayerNorm(dim, eps=1e-6) |
| | self.attn = Attention( |
| | dim, |
| | num_heads=num_heads, |
| | qkv_bias=qkv_bias, |
| | qk_scale=qk_scale, |
| | ) |
| | self.norm2 = nn.LayerNorm(dim, eps=1e-6) |
| | mlp_hidden_dim = int(dim * mlp_ratio) |
| | self.mlp = Mlp( |
| | in_features=dim, |
| | hidden_features=mlp_hidden_dim, |
| | act_layer=act_layer, |
| | ) |
| |
|
| | def forward(self, x): |
| | x = x + self.attn(self.norm1(x)) |
| | x = x + self.mlp(self.norm2(x)) |
| | return x |
| |
|
| |
|
| | @torch.jit.export |
| | def get_abs_pos( |
| | abs_pos: torch.Tensor, has_cls_token: bool, hw: List[int] |
| | ) -> torch.Tensor: |
| | """ |
| | Calculate absolute positional embeddings. If needed, resize embeddings and remove cls_token |
| | dimension for the original embeddings. |
| | Args: |
| | abs_pos (Tensor): absolute positional embeddings with (1, num_position, C). |
| | has_cls_token (bool): If true, has 1 embedding in abs_pos for cls token. |
| | hw (Tuple): size of input image tokens. |
| | |
| | Returns: |
| | Absolute positional embeddings after processing with shape (1, H, W, C) |
| | """ |
| | h = hw[0] |
| | w = hw[1] |
| | if has_cls_token: |
| | abs_pos = abs_pos[:, 1:] |
| | xy_num = abs_pos.shape[1] |
| | size = int(math.sqrt(xy_num)) |
| | assert size * size == xy_num |
| |
|
| | if size != h or size != w: |
| | new_abs_pos = F.interpolate( |
| | abs_pos.reshape(1, size, size, -1).permute(0, 3, 1, 2), |
| | size=(h, w), |
| | mode="bicubic", |
| | align_corners=False, |
| | ) |
| | return new_abs_pos.permute(0, 2, 3, 1) |
| | else: |
| | return abs_pos.reshape(1, h, w, -1) |
| |
|
| |
|
| | |
| | class ImageEncoderViT(nn.Module): |
| | def __init__( |
| | self, |
| | img_size: int, |
| | patch_size: int, |
| | in_chans: int, |
| | patch_embed_dim: int, |
| | normalization_type: str, |
| | depth: int, |
| | num_heads: int, |
| | mlp_ratio: float, |
| | neck_dims: List[int], |
| | act_layer: Type[nn.Module], |
| | ) -> None: |
| | """ |
| | Args: |
| | img_size (int): Input image size. |
| | patch_size (int): Patch size. |
| | in_chans (int): Number of input image channels. |
| | patch_embed_dim (int): Patch embedding dimension. |
| | depth (int): Depth of ViT. |
| | num_heads (int): Number of attention heads in each ViT block. |
| | mlp_ratio (float): Ratio of mlp hidden dim to embedding dim. |
| | act_layer (nn.Module): Activation layer. |
| | """ |
| | super().__init__() |
| |
|
| | self.img_size = img_size |
| | self.image_embedding_size = img_size // ((patch_size if patch_size > 0 else 1)) |
| | self.transformer_output_dim = ([patch_embed_dim] + neck_dims)[-1] |
| | self.pretrain_use_cls_token = True |
| | pretrain_img_size = 224 |
| | self.patch_embed = PatchEmbed(img_size, patch_size, in_chans, patch_embed_dim) |
| | |
| | num_patches = (pretrain_img_size // patch_size) * ( |
| | pretrain_img_size // patch_size |
| | ) |
| | num_positions = num_patches + 1 |
| | self.pos_embed = nn.Parameter(torch.zeros(1, num_positions, patch_embed_dim)) |
| | self.blocks = nn.ModuleList() |
| | for i in range(depth): |
| | vit_block = Block(patch_embed_dim, num_heads, mlp_ratio, True) |
| | self.blocks.append(vit_block) |
| | self.neck = nn.Sequential( |
| | nn.Conv2d( |
| | patch_embed_dim, |
| | neck_dims[0], |
| | kernel_size=1, |
| | bias=False, |
| | ), |
| | LayerNorm2d(neck_dims[0]), |
| | nn.Conv2d( |
| | neck_dims[0], |
| | neck_dims[0], |
| | kernel_size=3, |
| | padding=1, |
| | bias=False, |
| | ), |
| | LayerNorm2d(neck_dims[0]), |
| | ) |
| |
|
| | def forward(self, x: torch.Tensor) -> torch.Tensor: |
| | assert ( |
| | x.shape[2] == self.img_size and x.shape[3] == self.img_size |
| | ), "input image size must match self.img_size" |
| | x = self.patch_embed(x) |
| | |
| | x = x.permute(0, 2, 3, 1) |
| | x = x + get_abs_pos( |
| | self.pos_embed, self.pretrain_use_cls_token, [x.shape[1], x.shape[2]] |
| | ) |
| | num_patches = x.shape[1] |
| | assert x.shape[2] == num_patches |
| | x = x.reshape(x.shape[0], num_patches * num_patches, x.shape[3]) |
| | for blk in self.blocks: |
| | x = blk(x) |
| | x = x.reshape(x.shape[0], num_patches, num_patches, x.shape[2]) |
| | x = self.neck(x.permute(0, 3, 1, 2)) |
| | return x |
| |
|