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jedick
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microbial-DNA-pH

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train · 2.66k rows

sample_id stringlengths 9 11	study_name stringclasses 65 values	pH float64 1.34 12.5 ⌀	sequences listlengths 395 1.74k	num_sequences int64 395 1.74k	total_DNA_length int64 262k 263k	sample stringlengths 2 37	environment stringclasses 7 values	Bacteria bool 1 class	Archaea bool 1 class
SRR5000248	RMB+17	8.72	["TACGTAGGGGGCGAGCGTTGTCCGGAATCACTGGGCGTAAAGGGCGCGTAGGCGGCTTTAGAAGTCGCAGGTGAAATCCCGCGGCTCAACCGTGGAAC(...TRUNCATED)	1,738	262,152	WAB188.2015	Hyperalkaline	true	false
SRR5000240	RMB+17	11.38	["TACGGAGGGTGCGAGCGTTACCCGGATTTACTGGGTGTAAAGGGCGTGTAGGCGGTCTCTTTAGTCCGATGCTAAAGACCGAGGCTCAACCTCGGGAG(...TRUNCATED)	1,738	262,152	NSHQ14.2014	Hyperalkaline	true	false
SRR5000242	RMB+17	8.49	["TACGGAGGGTGCGAGCGTTGTTCGGAATCACTGGGCGTAAAGGGCGTGTAGGCGGTCCGCTAAGTCCGATGTGAAAGCCCGGGGCTCACCCCCGGAAG(...TRUNCATED)	1,738	262,152	WAB104.2016	Hyperalkaline	true	false
SRR5000239	RMB+17	11.04	["TACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGTAGGCGGTTTGTTAAGTCTGACGTGAAATCCCCGGGCTCAACCTGGGACG(...TRUNCATED)	1,738	262,152	WAB71.2015	Hyperalkaline	true	false
SRR5000254	RMB+17	8.34	["TACGTAGGGTCCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTAGGTGGTTTGTCGCGTTGTTCGTGAAAACTCACAACTCAATTGTGGGCG(...TRUNCATED)	1,738	262,152	WAB105.2016	Hyperalkaline	true	false
SRR5000257	RMB+17	10.6	["TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTACGCAGGCGGCTATGCAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAAC(...TRUNCATED)	1,738	262,152	WAB56.2015	Hyperalkaline	true	false
SRR5000247	RMB+17	8.36	["TACCAGCACCCCGAGTGGTCAGGATGATTATTTGGCCTAAAGCATCCGTAGCCGGCGCAGTAAGTCTTCCGTTAAATCCACCTGCTCAACGGATGGGC(...TRUNCATED)	1,738	262,152	NSHQ3B.2015	Hyperalkaline	true	false
SRR5000244	RMB+17	11.12	["TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTTGTAAGTTGGAGGTGAAATCCCCGGGCTCAACCTGGGAAC(...TRUNCATED)	1,738	262,152	WAB71.2016	Hyperalkaline	true	false
SRR5000252	RMB+17	10.98	["TACGAAGGGTGCAAGCGTTACTCGGTATTACTGGGCGTAAAGCGTGCGTAGGTGGTTCGTTAAGTCTGATGTGAAAGCCCTGGGCTCAACCTGGGTAT(...TRUNCATED)	1,738	262,152	WAB56.2016	Hyperalkaline	true	false
SRR5000243	RMB+17	9.19	["GACGTAGGGCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGAGCTCGTAGGCGGCTTGTCGCGTCGACCGTGAAAACCTGGGGCTCAACCCCAGGCC(...TRUNCATED)	1,738	262,152	WAB55.2016	Hyperalkaline	true	false

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