Pituitary ChromBPNet - Bias Models
Collection
All Tn5 bias models generated for the Pituitary ChromBPNet models. • 6 items • Updated
Tn5 Bias Model - Rat GH3
Description
Tn5 bias model trained as part of a ChromBPNet pipeline on pituitary ATAC-seq data. It models the sequence-intrinsic insertion bias of the Tn5 transposase, which must be accounted for before learning true chromatin accessibility signals.
Files
models/bias.h5— Trained Tn5 bias model
Training Details
- Genome: rn6
- Cell type: GH3
- Data type: Bulk ATAC-seq
- Framework: ChromBPNet
Source
- Andoniadou Lab (Unpublished)
Association
Part of a ChromBPNet atlas of pituitary cell types.
Inference Providers NEW
This model isn't deployed by any Inference Provider. 🙋 Ask for provider support